Hotels near Mission Bay, California in CA

Comfort Inn Sea World Area
3880 Greenwood St.,
San Diego, CA, 92110, US
4.44 km from Mission Bay, San Diego, CA 92109, USA
3.98 stars rating. Good. 496 reviews3.98 stars rating. Good. 496 reviews
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Strikethrough Rate:~~$105~~Discounted rate:$98USD/night
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Comfort Inn San Diego Airport At the Harbor
5102 N. Harbor Drive,
San Diego, CA, 92106, US
6.26 km from Mission Bay, San Diego, CA 92109, USA
3.93 stars rating. Good. 2085 reviews3.93 stars rating. Good. 2085 reviews
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Strikethrough Rate:~~$114~~Discounted rate:$103USD/night
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Comfort Inn San Diego Old Town
2380 Moore Street,
San Diego, CA, 92110, US
5.7 km from Mission Bay, San Diego, CA 92109, USA
3.62 stars rating. Good. 671 reviews3.62 stars rating. Good. 671 reviews
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Strikethrough Rate:~~$120~~Discounted rate:$108USD/night
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Comfort Inn Gaslamp Convention Center
660 G Street,
San Diego, CA, 92101, US
10.89 km from Mission Bay, San Diego, CA 92109, USA
3.91 stars rating. Good. 2247 reviews3.91 stars rating. Good. 2247 reviews
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Strikethrough Rate:~~$109~~Discounted rate:$91USD/night
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Rodeway Inn San Diego Near SDSU
5399 Adobe Falls Road,
San Diego, CA, 92120, US
14.92 km from Mission Bay, San Diego, CA 92109, USA
3.44 stars rating. Good. 1114 reviews3.44 stars rating. Good. 1114 reviews
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Strikethrough Rate:~~$79~~Discounted rate:$73USD/night
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Comfort Inn San Diego Miramar
9350 Kearny Mesa Road,
San Diego, CA, 92126, US
17.04 km from Mission Bay, San Diego, CA 92109, USA
3.36 stars rating. Good. 983 reviews3.36 stars rating. Good. 983 reviews
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Strikethrough Rate:~~$95~~Discounted rate:$88USD/night
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Quality Inn San Diego I-5 Naval Base
3878 Dalbergia Court,
San Diego, CA, 92113, US
16.42 km from Mission Bay, San Diego, CA 92109, USA
3.81 stars rating. Good. 718 reviews3.81 stars rating. Good. 718 reviews
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Strikethrough Rate:~~$114~~Discounted rate:$92USD/night
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Comfort Inn Chula Vista San Diego South
91 E. Bonita Road,
Chula Vista, CA, 91910, US
22.21 km from Mission Bay, San Diego, CA 92109, USA
3.85 stars rating. Good. 1808 reviews3.85 stars rating. Good. 1808 reviews
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Strikethrough Rate:~~$119~~Discounted rate:$107USD/night
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Country Inn & Suites by Radisson, San Diego North, CA
5975 Lusk Boulevard,
San Diego, CA, 92121, US
13.82 km from Mission Bay, San Diego, CA 92109, USA
4.27 stars rating. Excellent. 373 reviews4.27 stars rating. Excellent. 373 reviews
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Strikethrough Rate:~~$179~~Discounted rate:$161USD/night
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Quality Inn San Diego South - Chula Vista
778 Broadway,
Chula Vista, CA, 91910-5329, US
23 km from Mission Bay, San Diego, CA 92109, USA
3.81 stars rating. Good. 64 reviews3.81 stars rating. Good. 64 reviews
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Strikethrough Rate:~~$94~~Discounted rate:$87USD/night
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Quality Inn & Suites El Cajon San Diego East
650 N Mollison Ave, Building A,
El Cajon, CA, 92021, US
27.35 km from Mission Bay, San Diego, CA 92109, USA
2.16 stars rating. Fair. 251 reviews2.16 stars rating. Fair. 251 reviews
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Strikethrough Rate:~~$79~~Discounted rate:$73USD/night
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Rodeway Inn National City San Diego South
607 Roosevelt Ave,
National City, CA, 91950, US
17.02 km from Mission Bay, San Diego, CA 92109, USA
2.85 stars rating. Fair. 47 reviews2.85 stars rating. Fair. 47 reviews
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Strikethrough Rate:~~$92~~Discounted rate:$75USD/night
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Rodeway Inn Encinitas North
1444 N. Coast Hwy 101,
Encinitas, CA, 92024, US
33.01 km from Mission Bay, San Diego, CA 92109, USA
3.86 stars rating. Good. 874 reviews3.86 stars rating. Good. 874 reviews
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Strikethrough Rate:~~$74~~Discounted rate:$71USD/night
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Clarion Pointe El Cajon San Diego East
855 Sandalwood Dr,
El Cajon, CA, 92021, US
27.33 km from Mission Bay, San Diego, CA 92109, USA
2.5 stars rating. Fair. 117 reviews2.5 stars rating. Fair. 117 reviews
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Strikethrough Rate:~~$81~~Discounted rate:$77USD/night
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Rodeway Inn Santee San Diego East
10135 Mission Gorge Road,
Santee, CA, 92071-3813, US
25.68 km from Mission Bay, San Diego, CA 92109, USA
3.61 stars rating. Good. 517 reviews3.61 stars rating. Good. 517 reviews
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Strikethrough Rate:~~$89~~Discounted rate:$84USD/night
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Rodeway Inn Lemon Grove San Diego East
7458 Broadway,
Lemon Grove, CA, 91945, US
19.67 km from Mission Bay, San Diego, CA 92109, USA
2.57 stars rating. Fair. 75 reviews2.57 stars rating. Fair. 75 reviews
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Strikethrough Rate:~~$92~~Discounted rate:$77USD/night
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Comfort Inn Encinitas Near Legoland
607 Leucadia Blvd,
Encinitas, CA, 92024, US
31.93 km from Mission Bay, San Diego, CA 92109, USA
3.19 stars rating. Good. 1207 reviews3.19 stars rating. Good. 1207 reviews
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Strikethrough Rate:~~$99~~Discounted rate:$83USD/night
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Econo Lodge Inn & Suites Escondido Downtown
515 W Washington Avenue,
Escondido, CA, 92025, US
40.75 km from Mission Bay, San Diego, CA 92109, USA
3.62 stars rating. Good. 610 reviews3.62 stars rating. Good. 610 reviews
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Strikethrough Rate:~~$79~~Discounted rate:$73USD/night
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Rodeway Inn Escondido Downtown
250 W. El Norte Pkwy,
Escondido, CA, 92026, US
42.34 km from Mission Bay, San Diego, CA 92109, USA
3.2 stars rating. Good. 253 reviews3.2 stars rating. Good. 253 reviews
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Strikethrough Rate:~~$89~~Discounted rate:$83USD/night
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Quality Inn & Suites Oceanside Near Camp Pendleton
3170 Vista Way,
Oceanside, CA, 92056, US
45.36 km from Mission Bay, San Diego, CA 92109, USA
3.36 stars rating. Good. 851 reviews3.36 stars rating. Good. 851 reviews
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Strikethrough Rate:~~$89~~Discounted rate:$83USD/night
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Quality Suites San Diego Otay Mesa
2351 Otay Center Drive,
San Diego, CA, 92154-7614, US
37.54 km from Mission Bay, San Diego, CA 92109, USA
3.48 stars rating. Good. 482 reviews3.48 stars rating. Good. 482 reviews
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Strikethrough Rate:~~$99~~Discounted rate:$92USD/night
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Carlton Oaks Lodge, an Ascend Collection Hotel
9200 Inwood Drive,
Santee, CA, 92071, US
22.93 km from Mission Bay, San Diego, CA 92109, USA
3.26 stars rating. Good. 392 reviews3.26 stars rating. Good. 392 reviews
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Strikethrough Rate:~~$139~~Discounted rate:$120USD/night
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Comfort Inn Escondido San Diego North County
1290 West Valley Parkway,
Escondido, CA, 92029, US
39.44 km from Mission Bay, San Diego, CA 92109, USA
4.05 stars rating. Very Good. 1478 reviews4.05 stars rating. Very Good. 1478 reviews
$139USD/night
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Rodeway Inn El Cajon - San Diego East
1368 East Main Street,
El Cajon, CA, 92021, US
29.1 km from Mission Bay, San Diego, CA 92109, USA
2.45 stars rating. Fair. 11 reviews2.45 stars rating. Fair. 11 reviews
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Strikethrough Rate:~~$81~~Discounted rate:$68USD/night
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Quality Inn Escondido San Diego North County
501 W Mission Ave,
Escondido, CA, 92025, US
41.06 km from Mission Bay, San Diego, CA 92109, USA
3.34 stars rating. Good. 283 reviews3.34 stars rating. Good. 283 reviews
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Strikethrough Rate:~~$119~~Discounted rate:$111USD/night
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Sleep Inn Tijuana
Blvd. M. Clouthier No. 16651, Rio Tijuana,
Tijuana, BCN, 22226, MX
43.07 km from Mission Bay, San Diego, CA 92109, USA
3.82 stars rating. Good. 616 reviews3.82 stars rating. Good. 616 reviews
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Strikethrough Rate:~~$1,785~~Discounted rate:$1,607MXN/night
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Comfort Suites Tijuana
Av. C Niños Héroes 1584, Zona Centro,
Tijuana, BCN, 22000, MX
33.85 km from Mission Bay, San Diego, CA 92109, USA
No Reviews YetNo Reviews Yet
Coming soonStart booking Feb 14, 2026
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Good to know

Number of hotels

27 hotels in San Diego

Highest Price

$1,607

Lowest Price

$68

Avg. rating

26 hotels near Mission Bay, San Diego, CA 92109, USA

Comfort Inn Sea World Area

Comfort Inn San Diego Airport At the Harbor

Comfort Inn San Diego Old Town

Comfort Inn Gaslamp Convention Center

Rodeway Inn San Diego Near SDSU

Comfort Inn San Diego Miramar

Quality Inn San Diego I-5 Naval Base

Comfort Inn Chula Vista San Diego South

Country Inn & Suites by Radisson, San Diego North, CA

Quality Inn San Diego South - Chula Vista

Quality Inn & Suites El Cajon San Diego East

Rodeway Inn National City San Diego South

Rodeway Inn Encinitas North

Clarion Pointe El Cajon San Diego East

Rodeway Inn Santee San Diego East

Rodeway Inn Lemon Grove San Diego East

Comfort Inn Encinitas Near Legoland

Econo Lodge Inn & Suites Escondido Downtown

Rodeway Inn Escondido Downtown

Quality Inn & Suites Oceanside Near Camp Pendleton

Quality Suites San Diego Otay Mesa

Carlton Oaks Lodge, an Ascend Collection Hotel

Comfort Inn Escondido San Diego North County

Rodeway Inn El Cajon - San Diego East

Quality Inn Escondido San Diego North County

Sleep Inn Tijuana

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Comfort Suites Tijuana

Other San Diego searches

Good to know

27 hotels in San Diego

$1,607

$68

3.3 (18623 reviews)